Web Service BiOnym REST It

aka Taxon Name Search aka Taxa Names Search Workflow aka BiOnym Service aka i-Marine Service aka Taxa Names Search aka Taxa Names Reconciliation Service Add_annotation_inactiveAdd_annotation_inactiveLog in to add alternative_name
PASSED
Annotations: 32 Total number of annotations from the provider's definition / description document. 0 Total number of annotations submitted by members of BiodiversityCatalogue. 32 Total number of annotations sourced from other registries. 0

Overview

Provider:
Icon  wps-statistical-d4science-org

Location:
Pisa, Italy It

Submitter/Source:
Gianpaolo CoroIt (over 4 years ago)

Base URL:
http://wps.statistical.d4science.org/wps/WebProcessingService

Description(s):
by Gianpaolo Coro (over 4 years ago)

A WPS web service to use BiOnym, a flexible workflow approach to taxon name matching. The workflow allows to activate several taxa names matching algorithms and to get the list of possible transcriptions for a list of input raw species names with possible authorship indication.Also, it searches among several data sources of taxa names hosted by the i-Marine e-Infrastructure: Catalogue of Life, FishBase, World Register of Marine Species, Interim Register of Marine and Non-marine Genera, National Center for Biotechnology Information, and the Integrated Taxonomic Information System. This service focuses on the effectiveness of the search rather than on its efficiency.

ELIXIR Description(s): Info
No info yet
License(s): Info
by Gianpaolo Coro (over 4 years ago)

Creative Commons Attribution License (cc-by) V4.0 Distributed through the gCube software: www.gcube-system.org

Cost: Info
by Gianpaolo Coro (over 4 years ago)

Free. This service has been developed thanks to the funds received from the European Union’s Seventh Programme for research, technological development and demonstration under the iMarine (www.i-marine.eu) grant agreement No 283644

Currently, it is maintained by the D4Science e-Infrastructure at CNR, Pisa, Italy.

Usage conditions: Info
by Gianpaolo Coro (over 4 years ago)

No restrictions

How to cite this service: Info
by Gianpaolo Coro (about 4 years ago)

Edward Vanden Berghe, Gianpaolo Coro, Nicolas Bailly, Fabio Fiorellato, Caselyn Aldemita, Anton Ellenbroek, Pasquale Pagano, Retrieving taxa names from large biodiversity data collections using a flexible matching workflow, Ecological Informatics, Volume 28, July 2015, Pages 29-41, ISSN 1574-9541, http://dx.doi.org/10.1016/j.ecoinf.2015.05.004.

Publications about this service: Info
by Gianpaolo Coro (over 4 years ago)

Vanden Berghe E., Bailly N., Coro G., Fiorellato F., Aldemita C., Ellenbroek A., Pagano P. BiOnym: a flexible workflow approach to taxon name matching. Technical report, 2014. cnr.isti/2014-TR-022 Vanden Berghe E., Bailly N., Aldemita C., Fiorellato F., Coro G., Ellenbroek A., Pagano P. BiOnym - a flexible workflow approach to taxon name matching. In: TDWG 2013 - Taxonomic Database Working Group 2013 (Firenze, 28-31 October 2013).

Citations of this service: Info
No info yet
Example workflows using this service: Info
No info yet
Maturity level of this service (from the BioVeL wiki) and actions to improve it: Info
by Aleksandra Nenadic Admin(over 4 years ago)
https://wiki.biovel.eu/display/doc/BioVeL+Service+-+BiOnym

Actions to improve the service description

Provisional maturity level: 1 (subject to manual review)

To obtain level 2, this service requires the following 1 actions:

- Add description of available operations for variant BiOnym (REST)

Info Members Responsible for this Service (1)

Info Favourited By (1)